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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
130
candidate regulatory elements
123
accessible chromatin
109
target gene predictions
87
gene expression
82
chromatin state
49
binding sites
32
differential activity
32
histone modifications
31
variant allelic effects
29
eQTL
18
Fine-mapped variants
4
caQTL
2
pQTL
Date released
195
September, 2022
156
February, 2021
56
November, 2021
52
September, 2023
35
February, 2024
26
June, 2020
26
May, 2020
24
January, 2020
24
March, 2020
19
May, 2021
17
February, 2020
14
October, 2022
12
August, 2021
11
March, 2023
10
January, 2022
8
August, 2017
7
November, 2022
6
April, 2020
4
February, 2023
4
November, 2019
4
October, 2019
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
487
bed bed3+
135
tsv
85
bigWig
74
bed bed9
11
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
728
Homo sapiens
Biosample type
429
primary cell
204
tissue
52
in vitro differentiated cells
42
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
608
AMP
56
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
591
hg19
213
GRCh38
2
hg18
organ_slims!
mouth
BIOSAMPLE
TYPE
728 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 71 more…
tissue
adipose tissue
7
2
8
3
6
1
1
4
tibial nerve
6
3
3
2
4
2
2
3
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
1
1
6
3
tibial artery
3
3
2
1
3
2
2
3
+ See 16 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 9 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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