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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
candidate regulatory elements
78
target gene predictions
49
gene expression
48
chromatin state
31
binding sites
25
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
80
September, 2022
69
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
250
bed bed3+
63
tsv
55
bigWig
41
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
378
Homo sapiens
Biosample type
232
primary cell
76
tissue
43
in vitro differentiated cells
26
cell line
1
stem cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
304
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
307
hg19
122
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
378 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
osteoblast
5
2
2
1
3
2
fibroblast of lung
4
4
2
foreskin fibroblast
1
2
1
4
2
+ See 42 more…
tissue
adipose tissue
2
8
3
6
1
4
1
subcutaneous adipose tissue
2
5
1
6
1
1
3
omental fat pad
2
2
2
2
2
3
cartilage tissue
1
2
2
bone tissue
4
+ See 6 more…
in vitro differentiated cells
adipocyte
4
6
1
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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