Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
target gene predictions
87
accessible chromatin
48
chromatin state
40
candidate regulatory elements
28
gene expression
19
eQTL
16
variant allelic effects
14
differential activity
11
binding sites
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
120
September, 2022
February, 2021
50
November, 2021
26
May, 2021
20
June, 2020
18
February, 2024
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
254
bed bed3+
54
bigWig
42
tsv
41
bed bed9
2
bigBed bed9
1
bigBed narrowPeak
1
txt
Organism
361
Homo sapiens
Biosample type
225
primary cell
71
tissue
39
in vitro differentiated cells
25
cell line
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
349
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
287
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
310
hg19
122
GRCh38
2
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
361 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
eQTL
variant allelic effects
differential activity
binding sites
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
2
6
1
pericyte cell
10
10
1
1
fibroblast of lung
4
4
3
2
fibroblast of cardiac tissue
4
2
3
3
fibroblast of dermis
4
3
3
1
+ See 41 more…
tissue
adipose tissue
8
2
6
6
4
1
omental fat pad
2
2
2
2
2
2
3
subcutaneous adipose tissue
2
1
2
5
1
1
3
cartilage tissue
2
2
pancreatic stellate cell
2
+ See 7 more…
in vitro differentiated cells
adipocyte
6
4
6
2
mesenchymal stem cell
3
1
2
2
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 6 more…
cell line
pituitary stalk
10
GM23248
1
1
1
1
HT1080
1
1
1
foreskin fibroblast
1
1
1
fibroblast of cardiac tissue
2
+ See 3 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download