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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
208
candidate regulatory elements
154
target gene predictions
111
chromatin state
106
accessible chromatin
53
gene expression
48
binding sites
39
histone modifications
26
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
296
September, 2022
207
February, 2021
64
November, 2021
31
June, 2020
23
May, 2021
22
February, 2024
17
September, 2023
14
October, 2022
11
August, 2017
11
August, 2021
11
January, 2022
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
7
March, 2023
7
November, 2022
4
March, 2024
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
588
bed bed3+
100
bed bed9
69
tsv
62
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
786
Homo sapiens
Biosample type
350
primary cell
254
tissue
123
cell line
58
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
696
AMP
64
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
704
hg19
202
GRCh38
2
hg18
BIOSAMPLE
TYPE
786 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
osteoblast
2
2
1
5
2
3
2
+ See 53 more…
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
1
4
1
sigmoid colon
10
7
5
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
transverse colon
8
5
4
1
1
+ See 25 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RPMI7951
2
1
1
1
+ See 32 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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