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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
90
accessible chromatin
89
candidate regulatory elements
82
target gene predictions
52
chromatin state
50
gene expression
34
binding sites
26
histone modifications
21
eQTL
16
variant allelic effects
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
132
September, 2022
117
February, 2021
50
November, 2021
22
June, 2020
16
February, 2024
16
May, 2021
13
October, 2022
11
August, 2021
11
September, 2023
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
8
January, 2022
7
August, 2017
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2023
1
March, 2024
Available data
349
bed bed3+
55
bigWig
50
tsv
45
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
470
Homo sapiens
Biosample type
270
primary cell
111
tissue
50
in vitro differentiated cells
38
cell line
1
stem cell
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
402
AMP
50
ENCODE
9
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
410
hg19
128
GRCh38
2
hg18
annotation_type!
differential activity
BIOSAMPLE
TYPE
470 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 43 more…
tissue
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
3
omental fat pad
2
5
2
2
2
2
3
testis
1
7
3
3
1
1
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
NT2-D1 cell
1
1
1
1
2
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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