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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
159
candidate regulatory elements
124
target gene predictions
92
accessible chromatin
86
chromatin state
49
gene expression
43
binding sites
35
histone modifications
23
eQTL
12
differential activity
9
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
231
September, 2022
172
February, 2021
59
November, 2021
25
June, 2020
February, 2024
19
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
11
May, 2020
10
January, 2020
10
March, 2020
9
February, 2020
9
January, 2022
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
474
bed bed3+
78
bed bed9
65
tsv
58
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
642
Homo sapiens
Biosample type
331
primary cell
164
tissue
89
cell line
57
in vitro differentiated cells
1
stem cell
Organ
873
epithelium
651
kidney
465
brain
442
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
557
AMP
59
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
566
hg19
169
GRCh38
2
hg18
month_released!
February, 2024
BIOSAMPLE
TYPE
642 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
pericyte cell
1
10
10
1
foreskin keratinocyte
11
4
4
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 53 more…
tissue
thymus
20
14
1
11
1
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
3
omental fat pad
5
2
2
2
2
2
3
lower leg skin
6
2
2
+ See 13 more…
cell line
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
fibroblast of cardiac tissue
2
1
2
iPS DF 19.11
2
2
1
+ See 24 more…
in vitro differentiated cells
adipocyte
4
6
3
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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