Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
183
target gene predictions
181
candidate regulatory elements
110
accessible chromatin
101
chromatin state
56
gene expression
36
binding sites
histone modifications
27
eQTL
24
variant allelic effects
15
Fine-mapped variants
14
differential activity
2
caQTL
2
pQTL
Date released
267
September, 2022
146
February, 2021
69
February, 2024
52
November, 2021
27
June, 2020
20
May, 2020
20
May, 2021
18
March, 2020
17
January, 2020
17
September, 2023
15
February, 2020
13
October, 2022
11
August, 2021
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2019
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
546
bed bed3+
94
bed bed9
84
tsv
70
bigWig
7
txt
6
bigBed bed9
1
bigBed narrowPeak
Organism
751
Homo sapiens
Biosample type
341
tissue
275
primary cell
88
cell line
46
in vitro differentiated cells
1
stem cell
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
673
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
668
hg19
257
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
751 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
tissue
muscle of arm
16
33
1
16
1
muscle of leg
14
27
2
15
adipose tissue
8
7
2
6
3
1
4
1
tibial nerve
3
6
3
4
2
2
2
3
subcutaneous adipose tissue
2
2
1
5
6
1
3
1
+ See 33 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
4
6
4
2
osteoblast
2
2
5
1
2
3
foreskin fibroblast
2
6
1
1
4
+ See 46 more…
cell line
HeLa-S3
55
5
3
1
GM23248
1
2
1
1
1
HT1080
1
2
1
fibroblast of cardiac tissue
2
1
foreskin fibroblast
1
1
1
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download