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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
target gene predictions
candidate regulatory elements
77
accessible chromatin
58
gene expression
45
chromatin state
33
differential activity
18
binding sites
17
histone modifications
15
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
85
September, 2022
76
February, 2024
47
March, 2023
43
February, 2021
40
May, 2021
20
January, 2021
20
November, 2021
16
August, 2021
14
June, 2020
10
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
256
bed bed3+
86
tsv
59
bigWig
40
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
411
Homo sapiens
Biosample type
141
primary cell
133
cell line
116
tissue
20
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
369
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
310
hg19
141
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
411 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 16 more…
cell line
H1-hESC
39
1
8
1
2
1
EndoC_BH1
1
8
8
3
1
H9
8
1
HUES8
4
1
1
CyT49
4
1
+ See 18 more…
tissue
islet of Langerhans
1
6
11
3
2
1
13
1
2
2
2
pancreas
5
5
3
1
1
1
1
body of pancreas
5
2
4
1
1
3
chorionic villus
4
4
endocrine pancreas
4
4
+ See 12 more…
in vitro differentiated cells
endodermal cell
2
2
mesodermal cell
1
1
1
pancreatic ductal cell
3
trophoblast cell
2
1
cardiac mesoderm primordium
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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