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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
121
target gene predictions
77
accessible chromatin
68
candidate regulatory elements
53
gene expression
39
chromatin state
33
differential activity
18
binding sites
15
eQTL
15
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
107
September, 2022
75
February, 2021
73
February, 2024
47
March, 2023
37
May, 2021
20
January, 2021
20
November, 2021
16
August, 2021
14
June, 2020
10
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
315
bed bed3+
81
tsv
59
bigWig
34
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
459
Homo sapiens
Biosample type
161
cell line
149
tissue
148
primary cell
in vitro differentiated cells
1
stem cell
Organ
923
epithelium
651
kidney
462
brain
408
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
417
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
363
hg19
135
GRCh38
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
459 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
H1-hESC
39
1
1
8
1
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
1
2
1
1
+ See 20 more…
tissue
islet of Langerhans
1
6
11
3
2
13
1
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
1
7
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 16 more…
stem cell
H1-hESC
1
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