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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
265
gene expression
234
target gene predictions
231
accessible chromatin
207
candidate regulatory elements
103
chromatin state
92
differential activity
67
binding sites
47
histone modifications
41
variant allelic effects
6
eQTL
2
caQTL
Date released
301
September, 2022
291
February, 2021
155
September, 2023
131
November, 2021
127
February, 2024
45
May, 2021
41
June, 2020
38
March, 2023
31
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
March, 2024
3
August, 2017
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
828
bed bed3+
336
tsv
179
bigWig
100
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1295
Homo sapiens
Biosample type
880
primary cell
234
cell line
121
tissue
60
in vitro differentiated cells
stem cell
Organ
949
epithelium
652
kidney
465
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
214
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
980
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
931
hg19
342
GRCh38
biosample_type!
stem cell
BIOSAMPLE
TYPE
1295 results
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Clear Filters
gene expression
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
1
2
1
2
hepatocyte
13
3
8
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
2
6
5
2
1
+ See 155 more…
cell line
H1-hESC
8
39
1
1
1
2
1
EndoC_BH1
8
1
8
3
1
H9
8
7
1
GM23248
1
1
2
1
1
1
H7-hESC
2
1
1
1
1
+ See 43 more…
tissue
pigmented layer of retina
20
chorionic villus
4
8
4
breast epithelium
3
1
5
2
esophagus squamous epithelium
2
1
6
2
trophoblast
3
1
4
2
1
+ See 28 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 14 more…
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