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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
target gene predictions
81
candidate regulatory elements
77
accessible chromatin
56
gene expression
45
chromatin state
33
differential activity
17
binding sites
17
histone modifications
15
eQTL
11
variant allelic effects
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
125
September, 2022
84
February, 2021
76
February, 2024
47
March, 2023
40
May, 2021
20
January, 2021
20
November, 2021
16
August, 2021
14
June, 2020
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
332
bed bed3+
81
tsv
59
bigWig
40
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
482
Homo sapiens
Biosample type
160
cell line
148
primary cell
140
tissue
33
in vitro differentiated cells
1
stem cell
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
440
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
383
hg19
138
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
482 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
H1-hESC
39
1
1
8
1
2
1
EndoC_BH1
8
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 16 more…
tissue
islet of Langerhans
1
6
9
3
1
1
13
1
2
2
2
body of pancreas
5
8
2
4
1
1
pancreas
3
5
5
3
1
1
1
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 12 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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