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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
185
target gene predictions
128
candidate regulatory elements
89
accessible chromatin
72
chromatin state
64
binding sites
59
gene expression
42
histone modifications
33
differential activity
17
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
1
pQTL
Date released
200
September, 2022
158
February, 2021
104
February, 2024
47
March, 2023
44
May, 2021
26
June, 2020
20
January, 2021
20
November, 2021
20
October, 2022
19
August, 2021
10
March, 2020
7
August, 2018
6
August, 2017
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
527
bed bed3+
87
tsv
65
bed bed9
59
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
710
Homo sapiens
Biosample type
366
cell line
157
primary cell
153
tissue
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
668
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
608
hg19
194
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
710 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
pQTL
cell line
H1-hESC
39
1
1
1
2
8
1
K562
23
7
1
7
2
1
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
2
1
H9
8
7
1
+ See 51 more…
primary cell
pancreatic ductal cell
3
6
1
3
2
3
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 18 more…
tissue
islet of Langerhans
1
6
3
2
11
1
13
1
2
2
2
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 15 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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