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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
263
gene expression
221
accessible chromatin
204
target gene predictions
153
candidate regulatory elements
92
differential activity
79
chromatin state
54
binding sites
39
variant allelic effects
38
histone modifications
3
eQTL
2
caQTL
Date released
245
February, 2021
226
September, 2022
155
September, 2023
129
November, 2021
127
February, 2024
41
May, 2021
38
March, 2023
34
June, 2020
31
August, 2021
20
January, 2021
15
November, 2022
13
May, 2020
12
February, 2023
12
January, 2020
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
711
bed bed3+
334
tsv
176
bigWig
78
txt
75
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1148
Homo sapiens
Biosample type
828
primary cell
167
cell line
96
tissue
56
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
835
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
789
hg19
310
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
1148 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 147 more…
cell line
H1-hESC
8
1
39
1
1
2
1
EndoC_BH1
8
8
1
3
1
H9
8
7
1
H7-hESC
1
2
1
1
1
HUES6
1
1
2
1
1
+ See 24 more…
tissue
pigmented layer of retina
20
chorionic villus
4
8
4
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
trophoblast
1
3
4
2
1
+ See 21 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
See all biosamples
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