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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
target gene predictions
110
candidate regulatory elements
64
binding sites
61
chromatin state
40
histone modifications
35
accessible chromatin
19
gene expression
7
eQTL
6
Fine-mapped variants
4
variant allelic effects
2
caQTL
2
differential activity
Date released
171
September, 2022
138
February, 2021
79
February, 2024
25
June, 2020
21
October, 2022
13
May, 2021
10
August, 2021
7
March, 2020
5
May, 2020
5
September, 2023
4
February, 2020
4
January, 2020
3
August, 2017
3
February, 2023
3
January, 2022
2
November, 2019
2
November, 2021
1
March, 2024
1
May, 2019
Available data
405
bed bed3+
58
bed bed9
27
tsv
11
bigWig
2
bigBed bed9
Organism
497
Homo sapiens
Biosample type
326
cell line
80
tissue
60
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
490
AMP
5
KPMP
2
ENCODE
Genome assembly (visualization)
471
hg19
159
GRCh38
BIOSAMPLE
TYPE
497 results
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Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
caQTL
differential activity
cell line
H1-hESC
39
1
2
1
1
1
8
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
H9
8
7
1
GM06990
1
2
2
1
1
1
+ See 43 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
2
3
3
3
1
2
3
2
chorionic villus
4
8
4
trophoblast
3
4
1
2
1
embryonic facial prominence
1
1
1
1
+ See 7 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of pulmonary artery
1
2
2
1
1
1
pulmonary artery endothelial cell
1
2
1
1
1
1
peripheral blood mononuclear cell
4
1
1
Afferent / Efferent Arteriole Endothelial Cell
3
2
+ See 7 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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