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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
candidate regulatory elements
209
target gene predictions
130
chromatin state
57
accessible chromatin
43
binding sites
37
histone modifications
23
gene expression
11
eQTL
8
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
differential activity
Date released
368
September, 2022
207
February, 2021
58
February, 2024
31
June, 2020
31
November, 2021
20
May, 2021
9
January, 2022
9
March, 2020
8
August, 2021
7
October, 2022
6
August, 2017
5
March, 2024
5
May, 2020
5
September, 2023
4
February, 2020
4
January, 2020
3
February, 2023
2
November, 2019
1
May, 2019
Available data
617
bed bed3+
124
bed bed9
31
tsv
27
bigWig
2
bigBed bed9
Organism
783
Homo sapiens
Biosample type
334
tissue
235
cell line
174
primary cell
39
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
747
AMP
31
ENCODE
5
KPMP
Genome assembly (visualization)
747
hg19
234
GRCh38
BIOSAMPLE
TYPE
783 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
2
3
1
tibial artery
3
2
3
3
1
2
2
3
+ See 32 more…
cell line
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
+ See 43 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
+ See 25 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 7 more…
stem cell
H1-hESC
1
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