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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
target gene predictions
150
candidate regulatory elements
86
chromatin state
79
binding sites
60
accessible chromatin
46
gene expression
43
histone modifications
18
differential activity
15
variant allelic effects
9
Fine-mapped variants
8
eQTL
3
caQTL
Date released
225
September, 2022
172
February, 2021
96
February, 2024
35
September, 2023
28
June, 2020
24
October, 2022
16
January, 2020
15
May, 2020
14
May, 2021
13
March, 2020
11
August, 2021
8
November, 2021
5
February, 2020
4
August, 2017
4
February, 2023
4
March, 2023
3
April, 2020
3
January, 2022
3
November, 2019
2
October, 2019
1
March, 2024
1
May, 2019
Available data
522
bed bed3+
82
bed bed9
74
tsv
33
bigWig
8
bigBed bed9
2
txt
Organism
687
Homo sapiens
Biosample type
333
cell line
200
primary cell
121
tissue
32
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
641
AMP
35
KPMP
8
ENCODE
3
LungMap
Genome assembly (visualization)
615
hg19
218
GRCh38
BIOSAMPLE
TYPE
687 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
cell line
H1-hESC
39
1
1
2
1
8
1
K562
23
7
7
2
1
1
GM12878
8
2
2
2
1
1
H9
8
7
1
GM06990
1
2
1
2
1
1
+ See 46 more…
primary cell
endothelial cell of umbilical vein
4
6
5
2
2
1
trophoblast cell
5
7
4
1
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
2
6
2
fibroblast of pulmonary artery
1
2
1
2
1
1
+ See 33 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
2
3
3
3
1
2
3
2
ascending aorta
2
4
3
1
1
1
3
1
chorionic villus
4
8
4
aorta
4
4
4
1
+ See 11 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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