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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
141
target gene predictions
104
candidate regulatory elements
59
binding sites
36
histone modifications
24
accessible chromatin
3
chromatin state
1
pQTL
Date released
127
February, 2021
104
September, 2022
79
February, 2024
22
June, 2020
20
October, 2022
9
May, 2021
3
August, 2017
2
November, 2021
1
August, 2021
1
March, 2020
Available data
368
bed bed3+
52
bed bed9
11
tsv
2
bigWig
Organism
368
Homo sapiens
Biosample type
289
cell line
29
tissue
27
primary cell
22
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
366
AMP
2
ENCODE
Genome assembly (visualization)
368
hg19
81
GRCh38
BIOSAMPLE
TYPE
368 results
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target gene predictions
candidate regulatory elements
binding sites
histone modifications
accessible chromatin
chromatin state
pQTL
cell line
H1-hESC
39
1
2
1
1
K562
23
7
2
1
1
1
GM12878
8
2
2
1
1
1
H9
8
7
GM06990
1
2
2
1
1
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tissue
chorionic villus
4
8
trophoblast
3
4
1
1
embryonic facial prominence
1
1
1
first pancreatic bud
1
1
cardiogenic mesoderm
1
+ See 2 more…
primary cell
trophoblast cell
5
7
1
1
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
primordial germ cell
1
1
placental hematopoietic stem cell
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
mesodermal cell
1
4
1
trophoblast cell
2
2
ectodermal cell
1
2
cardiac mesoderm primordium
1
1
+ See 1 more…
stem cell
H1-hESC
1
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