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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
target gene predictions
62
candidate regulatory elements
30
chromatin state
13
binding sites
11
accessible chromatin
11
gene expression
11
histone modifications
1
eQTL
Date released
87
September, 2022
56
February, 2021
51
February, 2024
11
June, 2020
8
August, 2021
8
May, 2021
1
August, 2017
1
January, 2022
1
March, 2020
1
March, 2024
1
October, 2022
Available data
185
bed bed3+
29
bed bed9
11
tsv
Organism
226
Homo sapiens
Biosample type
127
cell line
48
tissue
30
in vitro differentiated cells
20
primary cell
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
226
AMP
2
ENCODE
Genome assembly (visualization)
214
hg19
81
GRCh38
BIOSAMPLE
TYPE
226 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
eQTL
cell line
H1-hESC
39
1
1
2
1
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 14 more…
tissue
chorionic villus
4
8
4
breast epithelium
3
5
2
1
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
+ See 4 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
primordial germ cell
1
1
stem cell
H1-hESC
1
See all biosamples
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