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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
137
candidate regulatory elements
100
accessible chromatin
76
chromatin state
59
gene expression
44
binding sites
35
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
161
February, 2021
134
September, 2022
34
November, 2021
30
June, 2020
19
August, 2021
18
February, 2024
15
September, 2023
13
October, 2022
10
January, 2020
9
February, 2020
9
May, 2020
8
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
6
March, 2020
5
May, 2021
3
April, 2020
3
May, 2022
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
Available data
345
bed bed3+
75
tsv
68
bed bed9
57
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
512
Homo sapiens
Biosample type
250
primary cell
110
tissue
91
cell line
60
in vitro differentiated cells
1
stem cell
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
453
AMP
34
ENCODE
15
KPMP
4
ITG
3
LungMap
2
community
1
T1D
Genome assembly (visualization)
429
hg19
133
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
512 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
1
2
6
osteoblast
2
5
1
2
3
2
foreskin fibroblast
6
1
1
4
2
trophoblast cell
7
1
4
1
fibroblast of lung
6
4
2
+ See 47 more…
tissue
adipose tissue
7
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
3
chorionic villus
8
4
trophoblast
4
1
2
1
+ See 10 more…
cell line
H1-hESC
1
1
1
8
2
1
H9
7
1
GM23248
2
1
1
1
1
HUES6
2
1
1
1
fibroblast of cardiac tissue
2
1
2
+ See 26 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
endodermal cell
4
2
mesodermal cell
4
1
1
chondrocyte
5
+ See 12 more…
stem cell
H1-hESC
1
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