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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
224
accessible chromatin
206
target gene predictions
157
candidate regulatory elements
92
differential activity
81
chromatin state
56
binding sites
41
variant allelic effects
39
histone modifications
3
eQTL
2
caQTL
Date released
232
September, 2022
164
February, 2021
129
November, 2021
111
February, 2024
62
September, 2023
35
June, 2020
29
March, 2023
22
May, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
7
April, 2020
7
October, 2022
5
October, 2019
4
August, 2017
3
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
725
bed bed3+
169
bigWig
90
tsv
77
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
901
Homo sapiens
Biosample type
606
primary cell
154
cell line
94
tissue
46
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
409
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
681
AMP
129
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
804
hg19
305
GRCh38
annotation_type!
gene expression
BIOSAMPLE
TYPE
901 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
endothelial cell of umbilical vein
2
4
6
5
2
1
hepatocyte
8
3
1
1
1
2
4
foreskin keratinocyte
4
11
4
trophoblast cell
1
5
7
4
1
+ See 132 more…
cell line
H1-hESC
1
39
1
1
2
1
H9
8
7
1
EndoC_BH1
8
1
3
1
H7-hESC
1
2
1
1
1
HUES6
1
1
2
1
1
+ See 25 more…
tissue
pigmented layer of retina
20
chorionic villus
4
8
4
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
trophoblast
1
3
4
2
1
+ See 19 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 6 more…
stem cell
H1-hESC
1
See all biosamples
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