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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
261
gene expression
224
accessible chromatin
206
target gene predictions
157
candidate regulatory elements
92
differential activity
81
chromatin state
56
binding sites
41
variant allelic effects
39
histone modifications
3
eQTL
2
caQTL
Date released
249
February, 2021
232
September, 2022
155
September, 2023
129
November, 2021
127
February, 2024
41
May, 2021
38
March, 2023
35
June, 2020
31
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
August, 2017
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
725
bed bed3+
332
tsv
178
bigWig
78
txt
77
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1162
Homo sapiens
Biosample type
841
primary cell
170
cell line
94
tissue
56
in vitro differentiated cells
1
stem cell
Organ
947
epithelium
650
kidney
465
brain
458
connective tissue
373
musculature of body
310
lung
286
intestine
277
pancreas
265
vasculature
255
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
156
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
849
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
805
hg19
314
GRCh38
month_released!
March, 2024
BIOSAMPLE
TYPE
1162 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 150 more…
cell line
H1-hESC
8
1
39
1
1
2
1
EndoC_BH1
8
8
1
3
1
H9
8
7
1
H7-hESC
1
2
1
1
1
HUES6
1
1
2
1
1
+ See 25 more…
tissue
pigmented layer of retina
20
chorionic villus
4
8
4
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
trophoblast
1
3
4
2
1
+ See 19 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
See all biosamples
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