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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
263
gene expression
204
target gene predictions
194
accessible chromatin
153
candidate regulatory elements
92
differential activity
79
chromatin state
54
binding sites
40
variant allelic effects
37
histone modifications
3
eQTL
2
caQTL
Date released
244
February, 2021
226
September, 2022
155
September, 2023
128
November, 2021
126
February, 2024
41
May, 2021
38
March, 2023
33
June, 2020
31
August, 2021
20
January, 2021
14
May, 2020
13
January, 2020
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
August, 2017
2
February, 2023
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
684
bed bed3+
334
tsv
161
bigWig
78
txt
75
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1121
Homo sapiens
Biosample type
825
primary cell
170
cell line
75
tissue
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
809
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
762
hg19
310
GRCh38
organ_slims!
eye
BIOSAMPLE
TYPE
1121 results
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Clear Filters
gene expression
target gene predictions
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
13
3
8
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
2
6
5
2
1
+ See 147 more…
cell line
H1-hESC
8
39
1
1
1
2
1
EndoC_BH1
8
1
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
1
2
1
1
+ See 25 more…
tissue
chorionic villus
4
8
4
breast epithelium
3
1
5
2
esophagus squamous epithelium
2
1
6
2
trophoblast
3
1
4
2
1
embryonic facial prominence
1
1
1
1
+ See 19 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
hepatocyte
1
2
1
+ See 11 more…
stem cell
H1-hESC
1
See all biosamples
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