Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
230
candidate regulatory elements
187
target gene predictions
123
chromatin state
33
accessible chromatin
25
binding sites
19
histone modifications
11
gene expression
2
eQTL
1
variant allelic effects
Date released
363
September, 2022
147
February, 2021
52
February, 2024
21
June, 2020
12
May, 2021
12
November, 2021
8
August, 2021
6
October, 2022
3
April, 2020
2
August, 2017
2
January, 2022
2
March, 2020
1
March, 2024
Available data
497
bed bed3+
121
bed bed9
12
bigWig
11
tsv
Organism
631
Homo sapiens
Biosample type
298
tissue
226
cell line
76
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
616
AMP
12
ENCODE
3
LungMap
Genome assembly (visualization)
618
hg19
186
GRCh38
BIOSAMPLE
TYPE
631 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
lung
33
17
16
1
1
placenta
26
15
14
1
1
2
1
left lung
26
13
13
right lung
22
11
11
1
chorionic villus
8
4
4
+ See 10 more…
cell line
A549
21
19
18
1
2
1
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
+ See 23 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of lung
6
4
4
2
fibroblast of villous mesenchyme
2
1
1
1
2
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
1
+ See 12 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
See all biosamples
Download