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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
347
candidate regulatory elements
237
target gene predictions
213
gene expression
176
chromatin state
77
accessible chromatin
56
differential activity
29
binding sites
21
histone modifications
17
variant allelic effects
5
eQTL
Date released
516
September, 2022
311
February, 2021
140
September, 2023
53
February, 2024
36
August, 2021
31
June, 2020
19
May, 2020
14
January, 2020
14
November, 2021
11
May, 2021
9
February, 2020
7
October, 2022
5
March, 2020
3
April, 2020
3
March, 2024
2
August, 2017
2
January, 2022
1
April, 2019
1
May, 2019
Available data
726
bed bed3+
262
tsv
174
bed bed9
87
txt
47
bigWig
2
bigBed bed9
Organism
1178
Homo sapiens
Biosample type
517
tissue
365
primary cell
264
cell line
31
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1021
AMP
140
KPMP
14
ENCODE
3
LungMap
Genome assembly (visualization)
901
hg19
265
GRCh38
BIOSAMPLE
TYPE
1178 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
tissue
kidney
29
14
7
16
10
1
2
1
1
lung
33
17
1
16
1
left lung
26
13
13
right lung
22
11
11
1
right kidney
20
10
10
1
1
+ See 25 more…
primary cell
epithelial cell of proximal tubule
2
1
16
1
1
1
1
glomerular endothelial cell
2
1
14
1
2
1
trophoblast cell
7
5
4
1
1
fibroblast of lung
6
4
4
2
glomerular visceral epithelial cell
2
1
5
1
2
+ See 73 more…
cell line
A549
21
19
18
1
2
1
H1-hESC
1
39
8
1
1
2
1
H9
7
8
1
HEK293
3
1
1
1
2
1
IMR-90
2
2
1
1
2
1
+ See 34 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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