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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
265
candidate regulatory elements
236
gene expression
189
target gene predictions
137
chromatin state
97
accessible chromatin
66
differential activity
41
binding sites
30
variant allelic effects
25
histone modifications
10
eQTL
9
Fine-mapped variants
3
caQTL
Date released
378
September, 2022
290
February, 2021
155
September, 2023
69
February, 2024
37
August, 2021
33
May, 2020
31
June, 2020
29
January, 2020
16
March, 2020
14
February, 2020
11
November, 2021
10
May, 2021
7
October, 2022
4
February, 2023
4
January, 2022
4
March, 2023
3
April, 2020
3
March, 2024
3
November, 2019
2
August, 2017
2
May, 2019
2
October, 2019
1
April, 2019
Available data
647
bed bed3+
305
tsv
135
bed bed9
89
txt
68
bigWig
10
bigBed bed9
Organism
1108
Homo sapiens
Biosample type
475
primary cell
420
tissue
179
cell line
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
939
AMP
155
KPMP
11
ENCODE
3
LungMap
Genome assembly (visualization)
792
hg19
270
GRCh38
BIOSAMPLE
TYPE
1108 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of umbilical vein
6
4
5
2
2
1
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 94 more…
tissue
kidney
29
7
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 30 more…
cell line
H1-hESC
1
8
39
1
1
2
1
H9
7
8
1
HEK293
3
1
1
1
2
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 30 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 5 more…
stem cell
H1-hESC
1
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