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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
112
target gene predictions
98
candidate regulatory elements
50
chromatin state
19
accessible chromatin
19
binding sites
13
histone modifications
10
gene expression
2
eQTL
Date released
137
September, 2022
82
February, 2021
54
February, 2024
16
June, 2020
8
August, 2021
8
May, 2021
6
November, 2021
4
August, 2017
2
January, 2022
2
March, 2020
2
March, 2024
2
October, 2022
Available data
265
bed bed3+
46
bed bed9
10
tsv
3
bigWig
Organism
323
Homo sapiens
Biosample type
161
cell line
153
tissue
in vitro differentiated cells
8
primary cell
1
stem cell
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
317
AMP
6
ENCODE
Genome assembly (visualization)
311
hg19
107
GRCh38
organ_slims!
extraembryonic component
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
323 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
H7-hESC
2
1
1
1
1
+ See 22 more…
tissue
large intestine
14
27
13
1
1
sigmoid colon
7
10
5
1
transverse colon
5
8
4
1
1
trophoblast
3
4
2
1
1
colonic mucosa
2
4
3
1
+ See 12 more…
primary cell
colon epithelial cell
3
3
primordial germ cell
1
1
stem cell
H1-hESC
1
See all biosamples
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