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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
target gene predictions
85
candidate regulatory elements
43
chromatin state
25
binding sites
19
accessible chromatin
16
histone modifications
10
gene expression
1
variant allelic effects
Date released
123
September, 2022
81
February, 2021
52
February, 2024
14
June, 2020
9
May, 2021
8
August, 2021
8
November, 2021
4
October, 2022
2
August, 2017
1
March, 2020
Available data
251
bed bed3+
41
bed bed9
10
tsv
5
bigWig
Organism
302
Homo sapiens
Biosample type
163
cell line
68
primary cell
37
tissue
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
294
AMP
8
ENCODE
Genome assembly (visualization)
292
hg19
100
GRCh38
BIOSAMPLE
TYPE
302 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
1
8
MCF-7
6
9
5
3
1
2
H9
8
7
1
T47D
2
3
2
H7-hESC
2
1
1
1
1
+ See 17 more…
primary cell
trophoblast cell
5
7
4
1
1
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
4
1
fibroblast of mammary gland
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
+ See 4 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
mammary gland
1
1
+ See 2 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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