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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
132
candidate regulatory elements
131
target gene predictions
68
chromatin state
25
accessible chromatin
19
binding sites
16
histone modifications
14
gene expression
4
eQTL
3
Fine-mapped variants
2
variant allelic effects
Date released
188
September, 2022
102
February, 2021
54
February, 2024
18
June, 2020
12
May, 2021
8
August, 2021
8
November, 2021
5
March, 2020
4
August, 2017
3
February, 2020
3
January, 2022
3
May, 2020
2
March, 2024
2
October, 2022
1
January, 2020
1
November, 2019
Available data
329
bed bed3+
64
bed bed9
18
tsv
7
bigWig
1
bigBed bed9
Organism
414
Homo sapiens
Biosample type
194
tissue
161
cell line
30
in vitro differentiated cells
28
primary cell
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
406
AMP
8
ENCODE
Genome assembly (visualization)
397
hg19
134
GRCh38
BIOSAMPLE
TYPE
414 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
13
1
1
tibial nerve
6
3
4
3
2
2
3
2
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
chorionic villus
8
4
4
+ See 14 more…
cell line
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
+ See 22 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
7
5
4
1
1
colon epithelial cell
3
3
primordial germ cell
1
1
placental hematopoietic stem cell
1
trophoblast giant cell
1
stem cell
H1-hESC
1
See all biosamples
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