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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
target gene predictions
86
candidate regulatory elements
39
chromatin state
20
binding sites
16
accessible chromatin
16
histone modifications
10
gene expression
Date released
114
September, 2022
81
February, 2021
51
February, 2024
14
June, 2020
8
August, 2021
8
May, 2021
3
October, 2022
2
November, 2021
1
August, 2017
1
March, 2020
Available data
235
bed bed3+
38
bed bed9
10
tsv
2
bigWig
Organism
283
Homo sapiens
Biosample type
142
cell line
63
primary cell
40
in vitro differentiated cells
37
tissue
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
281
AMP
2
ENCODE
Genome assembly (visualization)
273
hg19
91
GRCh38
BIOSAMPLE
TYPE
283 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 18 more…
primary cell
foreskin keratinocyte
4
11
4
trophoblast cell
5
7
4
1
1
foreskin fibroblast
2
6
1
4
1
2
foreskin melanocyte
1
4
1
primordial germ cell
1
1
+ See 2 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
olfactory neurosphere cell line
1
1
1
1
+ See 6 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
skin of prepuce of penis
1
1
+ See 2 more…
stem cell
H1-hESC
1
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