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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
152
target gene predictions
66
candidate regulatory elements
32
chromatin state
17
binding sites
15
accessible chromatin
14
histone modifications
13
gene expression
2
eQTL
Date released
102
February, 2024
93
September, 2022
64
February, 2021
19
May, 2021
12
June, 2020
8
August, 2021
4
November, 2021
3
March, 2024
2
January, 2022
2
October, 2022
1
August, 2017
1
March, 2020
Available data
265
bed bed3+
31
bed bed9
13
tsv
3
bigWig
Organism
311
Homo sapiens
Biosample type
202
cell line
51
tissue
30
in vitro differentiated cells
27
primary cell
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
307
AMP
4
ENCODE
Genome assembly (visualization)
296
hg19
139
GRCh38
BIOSAMPLE
TYPE
311 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
eQTL
cell line
HeLa-S3
55
5
3
1
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
pituitary stalk
10
H7-hESC
2
1
1
1
1
+ See 17 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
uterus
2
3
1
1
1
1
embryonic facial prominence
1
1
1
1
endometrium cancer
1
1
+ See 7 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
Ishikawa
1
1
1
primordial germ cell
1
1
uterine smooth muscle cell
1
1
placental hematopoietic stem cell
1
+ See 1 more…
stem cell
H1-hESC
1
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