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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
84
candidate regulatory elements
41
chromatin state
21
binding sites
18
histone modifications
17
accessible chromatin
11
gene expression
1
eQTL
1
variant allelic effects
Date released
120
September, 2022
82
February, 2021
52
February, 2024
15
June, 2020
9
May, 2021
8
August, 2021
2
November, 2021
1
August, 2017
1
January, 2022
1
March, 2020
1
March, 2024
1
October, 2022
Available data
241
bed bed3+
40
bed bed9
11
tsv
2
bigWig
Organism
293
Homo sapiens
Biosample type
180
cell line
50
tissue
32
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
291
AMP
2
ENCODE
Genome assembly (visualization)
281
hg19
94
GRCh38
organ_slims!
nose
artery
BIOSAMPLE
TYPE
293 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
2
1
1
1
1
+ See 24 more…
tissue
chorionic villus
4
8
4
prostate gland
2
4
2
2
2
1
1
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
epithelial cell of prostate
3
4
2
primordial germ cell
1
1
luminal epithelial cell of prostatic duct
1
placental hematopoietic stem cell
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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