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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
target gene predictions
112
candidate regulatory elements
90
accessible chromatin
61
chromatin state
59
gene expression
33
differential activity
26
binding sites
24
histone modifications
16
eQTL
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
173
September, 2022
122
February, 2021
77
February, 2024
47
March, 2023
42
May, 2021
20
January, 2021
20
November, 2021
19
June, 2020
16
August, 2021
10
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
August, 2017
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
415
bed bed3+
87
tsv
67
bigWig
56
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
588
Homo sapiens
Biosample type
214
cell line
182
tissue
158
primary cell
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
546
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
485
hg19
166
GRCh38
BIOSAMPLE
TYPE
588 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
H1-hESC
39
1
1
1
8
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
+ See 30 more…
tissue
islet of Langerhans
1
6
3
11
2
1
13
1
2
2
2
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 25 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 18 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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