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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
target gene predictions
90
candidate regulatory elements
46
chromatin state
24
binding sites
19
accessible chromatin
19
histone modifications
12
gene expression
2
variant allelic effects
1
eQTL
Date released
126
September, 2022
89
February, 2021
52
February, 2024
16
June, 2020
10
May, 2021
8
August, 2021
2
August, 2017
2
January, 2020
2
March, 2020
2
March, 2024
2
May, 2020
2
November, 2021
2
October, 2022
1
January, 2022
Available data
258
bed bed3+
44
bed bed9
12
tsv
3
bigWig
2
bigBed bed9
Organism
316
Homo sapiens
Biosample type
182
cell line
52
primary cell
51
tissue
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
314
AMP
2
ENCODE
Genome assembly (visualization)
302
hg19
99
GRCh38
BIOSAMPLE
TYPE
316 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
eQTL
cell line
H1-hESC
39
1
1
2
1
1
8
H9
8
7
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
2
1
1
1
1
+ See 25 more…
primary cell
endothelial cell of umbilical vein
4
6
5
2
2
1
trophoblast cell
5
7
4
1
1
epithelial cell of prostate
3
4
2
primordial germ cell
1
1
luminal epithelial cell of prostatic duct
1
+ See 2 more…
tissue
chorionic villus
4
8
4
prostate gland
2
4
2
2
1
2
1
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
first pancreatic bud
1
1
+ See 4 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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