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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
185
target gene predictions
179
candidate regulatory elements
90
chromatin state
77
binding sites
49
histone modifications
37
accessible chromatin
13
gene expression
5
eQTL
1
pQTL
1
variant allelic effects
Date released
258
September, 2022
195
February, 2021
80
February, 2024
30
June, 2020
24
October, 2022
16
May, 2021
12
November, 2021
11
August, 2021
4
August, 2017
3
January, 2022
3
March, 2024
1
March, 2020
Available data
533
bed bed3+
86
bed bed9
13
tsv
7
bigWig
Organism
637
Homo sapiens
Biosample type
402
cell line
131
primary cell
64
tissue
39
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
625
AMP
12
ENCODE
Genome assembly (visualization)
621
hg19
180
GRCh38
BIOSAMPLE
TYPE
637 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
pQTL
variant allelic effects
cell line
H1-hESC
39
1
1
2
1
1
8
K562
23
7
7
2
1
1
GM12878
8
2
2
2
1
1
H9
8
7
1
GM06990
1
2
1
2
1
1
+ See 65 more…
primary cell
foreskin keratinocyte
4
11
4
trophoblast cell
5
7
4
1
1
keratinocyte
5
3
3
1
2
2
1
foreskin fibroblast
2
6
1
4
2
1
fibroblast of dermis
4
4
3
1
+ See 14 more…
tissue
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
lower leg skin
2
6
2
skin of body
1
1
1
3
embryonic facial prominence
1
1
1
1
+ See 11 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 7 more…
stem cell
H1-hESC
1
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