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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
160
candidate regulatory elements
139
target gene predictions
78
chromatin state
43
binding sites
29
histone modifications
22
accessible chromatin
12
gene expression
3
eQTL
2
variant allelic effects
Date released
225
September, 2022
149
February, 2021
53
February, 2024
22
June, 2020
14
May, 2021
8
August, 2021
8
October, 2022
3
August, 2017
3
January, 2022
2
March, 2024
1
March, 2020
Available data
398
bed bed3+
75
bed bed9
12
tsv
Organism
488
Homo sapiens
Biosample type
233
cell line
150
primary cell
62
tissue
42
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
488
AMP
18
ENCODE
Genome assembly (visualization)
473
hg19
129
GRCh38
BIOSAMPLE
TYPE
488 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
variant allelic effects
cell line
H1-hESC
1
39
1
2
1
1
8
MCF-7
9
6
5
3
2
1
H9
7
8
1
GM23248
2
1
1
1
1
1
T47D
3
2
2
+ See 37 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
foreskin fibroblast
6
2
1
4
2
1
keratinocyte
3
3
3
1
2
1
fibroblast of dermis
4
4
3
1
+ See 13 more…
tissue
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
lower leg skin
6
2
2
skin of body
1
1
1
3
embryonic facial prominence
1
1
1
1
+ See 9 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 8 more…
stem cell
H1-hESC
1
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