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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
235
gene expression
159
accessible chromatin
114
target gene predictions
89
differential activity
candidate regulatory elements
47
chromatin state
39
variant allelic effects
30
binding sites
17
histone modifications
2
caQTL
1
eQTL
Date released
155
September, 2023
127
November, 2021
120
February, 2021
91
September, 2022
60
February, 2024
36
March, 2023
23
August, 2021
20
January, 2021
16
May, 2021
15
June, 2020
13
January, 2020
13
May, 2020
8
February, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
March, 2020
5
October, 2019
3
August, 2017
2
May, 2022
1
February, 2023
1
July, 2020
Available data
359
bed bed3+
305
tsv
151
bigWig
78
txt
44
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
733
Homo sapiens
Biosample type
733
primary cell
50
tissue
42
cell line
24
in vitro differentiated cells
Organ
733
epithelium
293
kidney
232
connective tissue
137
vasculature
126
pancreas
93
blood vessel
62
skin of body
61
liver
46
musculature of body
33
mammary gland
27
extraembryonic component
26
brain
25
artery
25
heart
25
lung
23
intestine
20
penis
17
eye
15
embryo
14
vein
13
lymphatic vessel
12
bone element
12
bronchus
11
adrenal gland
11
bone marrow
11
stomach
8
esophagus
8
placenta
6
large intestine
6
prostate gland
5
blood
5
bodily fluid
5
trachea
5
uterus
4
gonad
4
small intestine
3
thyroid gland
2
mouth
2
ovary
2
spinal cord
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
424
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
405
hg19
218
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
733 results
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table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
caQTL
eQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
1
hepatocyte
13
8
3
1
2
1
4
epithelial cell of proximal tubule
16
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
4
6
6
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
3
5
4
3
1
endothelial cell of umbilical vein
2
4
5
1
2
keratinocyte
2
5
3
1
1
2
mammary gland epithelial cell
1
4
3
1
1
glomerular visceral epithelial cell
5
2
1
1
bronchial epithelial cell
1
2
2
2
1
foreskin keratinocyte
4
4
retinal pigment epithelial cell
3
1
1
2
1
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
1
2
2
2
mammary epithelial cell
1
1
1
4
type II pneumocyte
4
2
1
colon epithelial cell
3
3
cortical cell of adrenal gland
3
2
1
enterocyte
3
3
kidney glomerular epithelial cell
1
2
1
1
1
luminal epithelial cell of mammary gland
2
3
1
pancreatic polypeptide-secreting cell
2
2
1
1
renal cortical epithelial cell
1
2
1
1
1
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
2
Afferent / Efferent Arteriole Endothelial Cell
3
2
Connecting Tubule Cell
3
2
Cortical Thick Ascending Limb Cell
3
2
Cycling Endothelial Cell
3
2
Cycling Epithelial Cell
3
2
Degenerative Connecting Tubule Cell
3
2
Degenerative Connecting Tubule Cell / Principal Cell
3
2
Degenerative Cortical Thick Ascending Limb Cell
3
2
Degenerative Distal Convoluted Tubule Cell
3
2
Degenerative Intercalated Cell Type A
3
2
Degenerative Peritubular Capillary Endothelial Cell
3
2
Degenerative Principal Cell
3
2
Degenerative Proximal Tubule Epithelial Cell
3
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
2
Descending Thin Limb Cell Type 1
3
2
Distal Convoluted Tubule Cell Type 1
3
2
Glomerular Capillary Endothelial Cell
3
2
Intercalated Cell Type A
3
2
Intercalated Cell Type B
3
2
Lymphatic Endothelial Cell
3
2
Medullary Thick Ascending Limb Cell
3
2
Parietal Epithelial Cell
3
2
Peritubular Capillary Endothelial Cell
3
2
Podocyte
3
2
Principal Cell
3
2
Proximal Tubule Epithelial Cell Segment 1 and 2
3
2
Proximal Tubule Epithelial Cell Segment 3
3
2
Transitional Principal-Intercalated Cell
3
2
choroid plexus epithelial cell
1
1
1
1
1
epithelial cell of prostate
3
2
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
4
1
kidney epithelial cell
1
1
1
1
1
kidney loop of Henle thick ascending limb epithelial cell
5
pancreatic endothelial cell
1
1
3
pulmonary artery endothelial cell
1
1
1
1
1
tracheal epithelial cell
1
2
2
aortic endothelial cell
2
1
1
dermis blood vessel endothelial cell
2
2
dermis lymphatic vessel endothelial cell
2
2
endothelial cell of lymphatic vessel
3
1
epithelial cell of esophagus
1
1
2
kidney capillary endothelial cell
1
1
1
1
kidney connecting tubule epithelial cell
4
mesothelial cell
2
1
1
myoepithelial cell of mammary gland
2
2
pancreatic alpha+beta cell
1
3
pancreatic cycling alpha cell
1
3
pancreatic gamma+epsilon cell
1
3
type I pneumocyte
3
1
S-shaped body
3
brain microvascular endothelial cell
1
1
1
club cell
2
1
endocardial cell
2
1
goblet cell
1
2
iris pigment epithelial cell
1
1
1
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
meso-epithelial cell
1
1
1
non-pigmented ciliary epithelial cell
1
1
1
pancreatic A cell
3
parietal cell
1
1
1
peptic cell
1
1
1
thyroid follicular cell
1
1
1
type B pancreatic cell
3
basal cell of epidermis
1
1
capillary endothelial cell
2
cardiac endothelial cell
1
1
cholangiocyte
1
1
eccrine cell
1
1
endothelial cell of coronary artery
1
1
enterochromaffin-like cell
1
1
enterocyte of epithelium of small intestine
1
1
epidermal melanocyte
1
1
epithelial cell of amnion
1
1
foveolar cell of stomach
1
1
granular cell of epidermis
1
1
kidney inner medulla collecting duct intercalated cell
2
lung microvascular endothelial cell
1
1
myoepithelial cell
1
1
non keratinizing barrier epithelial cell
1
1
paneth cell
1
1
renal principal cell
1
1
renal vesicle
2
respiratory goblet cell
1
1
small intestine goblet cell
1
1
stomach neuroendocrine cell
1
1
type I cell of adrenal cortex
1
1
type II cell of adrenal cortex
1
1
ureteric bud
1
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
bronchial goblet cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
enteroendocrine cell
1
epithelial cell of distal tubule
1
gastric goblet cell
1
granulosa cell
1
intestinal epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
neuroendocrine cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal intercalated cell
1
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