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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
accessible chromatin
139
target gene predictions
124
candidate regulatory elements
97
differential activity
72
chromatin state
52
variant allelic effects
48
binding sites
31
histone modifications
9
Fine-mapped variants
9
eQTL
5
caQTL
Date released
217
February, 2021
185
September, 2022
165
September, 2023
53
February, 2024
49
November, 2021
38
March, 2023
29
May, 2021
24
May, 2020
17
March, 2020
16
August, 2021
13
February, 2020
10
January, 2021
8
October, 2022
6
August, 2018
6
January, 2020
5
February, 2023
3
August, 2017
3
January, 2022
3
March, 2024
2
October, 2019
1
July, 2020
1
May, 2019
Available data
401
bed bed3+
355
tsv
80
txt
69
bed bed9
17
bigWig
8
bigBed bed9
7
bigBed narrowPeak
6
csv
Organism
854
Homo sapiens
Biosample type
698
primary cell
105
tissue
34
cell line
17
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
370
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
628
AMP
165
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
480
hg19
156
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
854 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
hepatocyte
13
3
1
1
2
1
4
endothelial cell
9
7
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
foreskin keratinocyte
4
11
4
glomerular endothelial cell
14
1
2
1
1
+ See 143 more…
tissue
coronary artery
1
3
3
3
2
3
2
1
tibial artery
1
2
3
3
2
3
2
ascending aorta
1
2
4
3
1
3
1
aorta
1
4
4
4
breast epithelium
3
5
2
+ See 14 more…
cell line
EndoC_BH1
8
1
3
1
keratinocyte
3
1
colon epithelial cell
1
1
1
smooth muscle cell of the coronary artery
1
1
1
choroid plexus epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
mammary gland epithelial cell
1
1
+ See 3 more…
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