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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
binding sites
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
163
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
44
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2020
1
November, 2019
1
October, 2022
Available data
466
bed bed3+
324
tsv
172
bigWig
78
txt
50
bed bed9
10
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
865
Homo sapiens
Biosample type
750
primary cell
59
tissue
33
cell line
23
in vitro differentiated cells
Organ
865
epithelium
629
kidney
433
brain
413
connective tissue
361
musculature of body
301
lung
280
intestine
261
pancreas
240
heart
234
limb
230
vasculature
202
embryo
185
skin of body
179
blood vessel
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
139
liver
117
stomach
101
eye
84
adipose tissue
84
small intestine
81
bone element
79
uterus
74
mammary gland
72
adrenal gland
70
placenta
69
prostate gland
65
artery
61
ureter
57
penis
50
lymph node
48
thymus
47
gonad
43
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
23
nerve
23
ovary
23
testis
22
thyroid gland
19
lymphatic vessel
19
mouth
19
vein
18
skeleton
13
breast
13
bronchus
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
554
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
519
hg19
228
GRCh38
annotation_type!
binding sites
variant allelic effects
BIOSAMPLE
TYPE
865 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
1
2
hepatocyte
13
8
3
1
1
4
epithelial cell of proximal tubule
16
1
1
2
1
glomerular endothelial cell
14
2
1
2
1
foreskin keratinocyte
4
11
4
+ See 140 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 14 more…
cell line
EndoC_BH1
8
8
1
3
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
epithelial cell of prostate
1
1
dermis lymphatic vessel endothelial cell
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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