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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
243
candidate regulatory elements
238
accessible chromatin
188
target gene predictions
121
chromatin state
94
differential activity
50
variant allelic effects
binding sites
33
histone modifications
5
eQTL
2
caQTL
Date released
349
September, 2022
265
February, 2021
160
September, 2023
128
November, 2021
70
February, 2024
38
March, 2023
35
August, 2021
34
May, 2021
33
June, 2020
27
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
6
August, 2018
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
1
October, 2022
Available data
751
bed bed3+
357
tsv
195
bigWig
118
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1258
Homo sapiens
Biosample type
811
primary cell
351
tissue
72
cell line
24
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
941
AMP
160
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
872
hg19
314
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1258 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
1
8
3
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 154 more…
tissue
kidney
7
29
10
14
16
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 28 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
3
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 5 more…
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