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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
246
candidate regulatory elements
239
accessible chromatin
202
target gene predictions
127
chromatin state
93
differential activity
binding sites
48
variant allelic effects
35
histone modifications
10
eQTL
6
Fine-mapped variants
4
caQTL
Date released
355
September, 2022
250
February, 2021
155
September, 2023
138
November, 2021
85
February, 2024
40
May, 2021
38
March, 2023
31
June, 2020
24
August, 2021
20
January, 2021
20
May, 2020
19
January, 2020
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
May, 2022
4
March, 2024
3
October, 2022
2
May, 2019
1
January, 2022
1
July, 2020
1
November, 2019
Available data
778
bed bed3+
338
tsv
192
bigWig
121
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1274
Homo sapiens
Biosample type
834
primary cell
364
tissue
51
cell line
25
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
952
AMP
155
KPMP
138
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
917
hg19
324
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1274 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
1
8
3
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 154 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 37 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
colon epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 5 more…
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