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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
histone modifications
3
eQTL
2
caQTL
Date released
155
September, 2023
127
November, 2021
120
February, 2021
102
September, 2022
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
20
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
419
bed bed3+
324
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
821
Homo sapiens
Biosample type
716
primary cell
47
tissue
36
cell line
22
in vitro differentiated cells
Organ
821
epithelium
487
kidney
353
connective tissue
307
brain
247
pancreas
222
musculature of body
208
vasculature
179
heart
176
lung
168
intestine
159
blood vessel
148
limb
147
embryo
146
bodily fluid
140
blood
119
liver
116
skin of body
100
large intestine
87
eye
82
extraembryonic component
72
uterus
69
adipose tissue
67
stomach
60
artery
58
bone element
54
mammary gland
47
small intestine
45
adrenal gland
44
prostate gland
41
placenta
37
lymph node
33
ureter
32
gonad
31
penis
28
esophagus
28
thymus
27
spinal cord
19
nerve
19
spleen
16
lymphatic vessel
16
testis
16
vein
15
ovary
15
thyroid gland
14
lymphoid tissue
14
skeleton
12
pituitary gland
11
bronchus
11
mouth
9
bone marrow
8
breast
7
urinary bladder
6
tongue
6
vagina
3
nose
3
trachea
1
pericardium
Project
510
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
472
hg19
230
GRCh38
annotation_type!
candidate regulatory elements
histone modifications
BIOSAMPLE
TYPE
821 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
3
1
1
2
epithelial cell of proximal tubule
16
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
pancreatic beta cell
3
8
3
3
1
+ See 143 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
2
esophagus squamous epithelium
1
2
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
choroid plexus epithelial cell
1
1
colon epithelial cell
1
1
epithelial cell of prostate
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
foreskin keratinocyte
1
1
+ See 4 more…
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