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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
209
accessible chromatin
122
target gene predictions
candidate regulatory elements
43
binding sites
38
variant allelic effects
28
histone modifications
3
chromatin state
2
caQTL
2
eQTL
Date released
127
November, 2021
59
February, 2021
58
February, 2024
55
September, 2022
24
June, 2020
20
January, 2021
17
May, 2021
15
November, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
447
bed bed3+
324
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
447
Homo sapiens
Biosample type
359
primary cell
43
tissue
30
cell line
15
in vitro differentiated cells
Organ
447
epithelium
250
connective tissue
198
brain
150
kidney
143
bodily fluid
138
blood
135
musculature of body
135
pancreas
121
embryo
115
intestine
113
vasculature
108
lung
103
heart
90
skin of body
84
blood vessel
81
limb
80
eye
78
liver
68
large intestine
67
uterus
53
extraembryonic component
45
bone element
45
mammary gland
42
stomach
36
artery
36
prostate gland
33
lymph node
30
adipose tissue
29
adrenal gland
27
placenta
27
small intestine
26
penis
20
gonad
20
ureter
18
thymus
16
esophagus
13
spinal cord
11
pituitary gland
11
skeleton
11
spleen
11
vein
10
bronchus
10
lymphatic vessel
10
testis
9
bone marrow
9
lymphoid tissue
9
ovary
9
thyroid gland
8
nerve
5
mouth
5
trachea
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
Project
293
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
446
hg19
175
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
447 results
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Clear Filters
accessible chromatin
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
7
2
2
1
2
1
hepatocyte
8
3
1
2
4
endothelial cell of hepatic sinusoid
6
6
keratinocyte
2
5
1
1
2
1
pancreatic beta cell
8
3
1
+ See 92 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
esophagus squamous epithelium
1
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 12 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
hepatocyte
1
See all biosamples
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