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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
target gene predictions
100
candidate regulatory elements
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
194
February, 2021
102
September, 2022
93
September, 2023
78
November, 2021
76
February, 2024
25
June, 2020
24
May, 2021
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
11
February, 2023
10
January, 2021
9
February, 2020
9
March, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
March, 2020
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
425
bed bed3+
234
tsv
173
bigWig
78
txt
50
bed bed9
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
735
Homo sapiens
Biosample type
616
primary cell
56
tissue
38
cell line
25
in vitro differentiated cells
Organ
735
epithelium
521
kidney
390
brain
366
connective tissue
294
musculature of body
233
lung
217
vasculature
216
intestine
206
heart
200
pancreas
195
limb
167
blood vessel
161
bodily fluid
160
skin of body
152
blood
131
embryo
131
liver
130
large intestine
110
extraembryonic component
100
eye
89
stomach
74
adipose tissue
73
bone element
68
mammary gland
65
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
17
thyroid gland
16
lymphatic vessel
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
547
AMP
93
KPMP
78
ENCODE
10
T1D
7
LungMap
Genome assembly (visualization)
478
hg19
185
GRCh38
annotation_type!
differential activity
target gene predictions
BIOSAMPLE
TYPE
735 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
2
2
1
1
2
hepatocyte
13
8
1
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 144 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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