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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
eQTL
2
caQTL
Date released
194
February, 2021
155
September, 2023
102
September, 2022
78
November, 2021
74
February, 2024
38
March, 2023
25
June, 2020
24
May, 2021
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
January, 2021
8
February, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
March, 2020
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
423
bed bed3+
324
tsv
173
bigWig
78
txt
50
bed bed9
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
824
Homo sapiens
Biosample type
704
primary cell
54
tissue
41
cell line
25
in vitro differentiated cells
Organ
824
epithelium
573
kidney
361
brain
361
connective tissue
288
musculature of body
232
lung
229
vasculature
218
pancreas
213
intestine
200
heart
190
limb
173
blood vessel
159
bodily fluid
157
skin of body
150
blood
131
embryo
128
large intestine
127
liver
109
extraembryonic component
99
eye
88
stomach
73
bone element
68
mammary gland
63
adipose tissue
62
artery
62
prostate gland
60
small intestine
55
placenta
53
lymph node
53
penis
51
adrenal gland
51
ureter
36
gonad
35
thymus
32
esophagus
32
spinal cord
25
spleen
24
uterus
20
nerve
20
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
16
thyroid gland
15
ovary
15
skeleton
14
mouth
13
bronchus
10
bone marrow
9
breast
8
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
572
AMP
155
KPMP
78
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
475
hg19
185
GRCh38
annotation_type!
eQTL
target gene predictions
BIOSAMPLE
TYPE
824 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell
9
15
2
2
1
2
hepatocyte
13
8
1
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 144 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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