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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
histone modifications
3
eQTL
2
caQTL
Date released
150
September, 2022
127
November, 2021
87
February, 2021
62
September, 2023
60
February, 2024
29
March, 2023
25
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
8
August, 2021
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
519
bed bed3+
167
bigWig
90
tsv
50
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
668
Homo sapiens
Biosample type
567
primary cell
56
tissue
29
cell line
16
in vitro differentiated cells
Organ
668
epithelium
444
kidney
399
brain
384
connective tissue
357
musculature of body
306
lung
278
intestine
237
limb
228
heart
223
pancreas
222
vasculature
194
embryo
192
bodily fluid
189
skin of body
182
blood
173
blood vessel
167
large intestine
141
extraembryonic component
118
liver
116
stomach
104
eye
84
small intestine
82
mammary gland
79
bone element
79
uterus
75
adipose tissue
72
adrenal gland
70
placenta
70
prostate gland
64
ureter
62
artery
59
penis
58
lymph node
48
thymus
47
gonad
43
esophagus
42
spinal cord
33
spleen
24
testis
23
nerve
22
lymphoid tissue
22
ovary
22
thyroid gland
21
vein
18
mouth
18
skeleton
17
lymphatic vessel
15
bronchus
12
breast
11
bone marrow
11
pituitary gland
9
tongue
9
urinary bladder
9
vagina
4
nose
3
trachea
Project
450
AMP
127
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
571
hg19
221
GRCh38
annotation_type!
gene expression
histone modifications
BIOSAMPLE
TYPE
668 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
15
7
2
2
1
2
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
hepatocyte
8
3
1
1
1
2
keratinocyte
2
5
3
3
1
1
+ See 127 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
endothelial cell
1
+ See 11 more…
cell line
EndoC_BH1
8
1
3
1
colon epithelial cell
1
1
1
keratinocyte
3
choroid plexus epithelial cell
1
1
epithelial cell of prostate
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
dermis microvascular lymphatic vessel endothelial cell
1
1
foreskin keratinocyte
1
1
mammary gland epithelial cell
1
1
See all biosamples
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