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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
211
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
53
chromatin state
43
binding sites
variant allelic effects
28
histone modifications
3
eQTL
1
caQTL
1
gene expression
Date released
151
September, 2022
127
November, 2021
110
February, 2021
35
February, 2024
24
June, 2020
20
January, 2021
17
May, 2021
15
November, 2022
14
January, 2020
11
August, 2021
10
February, 2023
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
May, 2020
1
November, 2019
Available data
508
bed bed3+
163
bigWig
50
bed bed9
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
562
Homo sapiens
Biosample type
455
primary cell
59
tissue
30
cell line
18
in vitro differentiated cells
Organ
562
epithelium
413
brain
376
kidney
372
connective tissue
360
musculature of body
308
lung
280
intestine
229
limb
219
heart
217
bodily fluid
206
blood
205
embryo
198
skin of body
191
vasculature
175
pancreas
170
large intestine
152
blood vessel
145
extraembryonic component
121
liver
114
stomach
105
eye
86
mammary gland
85
bone element
83
small intestine
80
uterus
75
prostate gland
72
placenta
70
adrenal gland
66
adipose tissue
64
penis
62
lymph node
61
ureter
56
artery
49
thymus
45
gonad
41
spinal cord
38
esophagus
32
spleen
23
lymphoid tissue
23
testis
21
ovary
21
vein
20
nerve
20
thyroid gland
18
skeleton
17
mouth
16
lymphatic vessel
15
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
408
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
562
hg19
234
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
562 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
eQTL
caQTL
gene expression
primary cell
endothelial cell
15
7
2
1
1
1
1
endothelial cell of umbilical vein
2
4
6
5
2
foreskin keratinocyte
4
11
4
hepatocyte
8
3
1
1
1
4
keratinocyte
2
5
3
3
1
2
+ See 88 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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