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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
219
accessible chromatin
150
candidate regulatory elements
150
target gene predictions
92
differential activity
76
chromatin state
54
binding sites
variant allelic effects
36
histone modifications
6
eQTL
2
caQTL
Date released
237
February, 2021
220
September, 2022
155
September, 2023
129
November, 2021
50
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
23
August, 2021
20
January, 2021
15
November, 2022
14
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
4
March, 2024
3
August, 2017
3
January, 2022
2
May, 2022
1
July, 2020
1
May, 2020
1
November, 2019
Available data
613
bed bed3+
326
tsv
173
bigWig
78
txt
73
bed bed9
10
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1040
Homo sapiens
Biosample type
819
primary cell
105
cell line
86
tissue
30
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
727
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
689
hg19
262
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1040 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
8
1
3
1
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of umbilical vein
2
6
4
5
2
+ See 145 more…
cell line
EndoC_BH1
8
8
1
3
GM23248
1
2
1
1
1
1
RPMI7951
1
2
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 24 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
+ See 6 more…
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