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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
209
accessible chromatin
135
target gene predictions
131
candidate regulatory elements
92
differential activity
66
chromatin state
44
variant allelic effects
43
binding sites
28
histone modifications
3
eQTL
2
caQTL
Date released
214
February, 2021
190
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
18
May, 2020
17
January, 2020
15
November, 2022
12
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
591
bed bed3+
324
tsv
172
bigWig
78
txt
63
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1006
Homo sapiens
Biosample type
812
primary cell
125
tissue
43
cell line
26
in vitro differentiated cells
Organ
942
epithelium
652
kidney
466
brain
455
connective tissue
375
musculature of body
308
lung
289
intestine
277
pancreas
263
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
202
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
702
AMP
155
KPMP
127
ENCODE
20
T1D
LungMap
2
community
Genome assembly (visualization)
657
hg19
250
GRCh38
award.project!
LungMap
BIOSAMPLE
TYPE
1006 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 144 more…
tissue
renal pelvis
2
9
19
9
1
pigmented layer of retina
20
left renal pelvis
1
2
6
2
1
right renal pelvis
1
2
6
2
1
breast epithelium
1
3
5
2
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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