Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
161
gene expression
147
candidate regulatory elements
129
accessible chromatin
120
target gene predictions
89
binding sites
80
chromatin state
53
histone modifications
41
variant allelic effects
28
differential activity
5
eQTL
2
caQTL
1
pQTL
Date released
270
February, 2021
226
September, 2022
104
February, 2024
38
May, 2021
37
June, 2020
36
March, 2023
26
August, 2021
25
October, 2022
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
583
bed bed3+
170
tsv
81
bigWig
78
txt
75
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
856
Homo sapiens
Biosample type
519
primary cell
246
cell line
65
tissue
26
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
856
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
663
hg19
160
GRCh38
BIOSAMPLE
TYPE
856 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
histone modifications
variant allelic effects
differential activity
eQTL
caQTL
pQTL
primary cell
hepatocyte
13
1
7
2
1
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
endothelial cell
9
4
2
1
2
1
2
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
2
5
1
+ See 88 more…
cell line
K562
7
1
23
2
7
1
EndoC_BH1
8
8
1
1
1
GM12878
2
1
8
2
2
1
GM06990
2
1
1
2
1
1
GM19240
1
1
2
2
1
1
+ See 37 more…
tissue
pigmented layer of retina
20
breast epithelium
5
1
3
2
esophagus squamous epithelium
6
1
2
2
blood
2
kidney epithelium
1
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
Download