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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
candidate regulatory elements
161
gene expression
137
target gene predictions
123
accessible chromatin
123
chromatin state
52
binding sites
41
variant allelic effects
32
histone modifications
28
differential activity
4
eQTL
2
caQTL
Date released
358
September, 2022
264
February, 2021
76
February, 2024
38
May, 2021
36
March, 2023
31
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
615
bed bed3+
170
tsv
119
bed bed9
81
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
931
Homo sapiens
Biosample type
526
primary cell
242
tissue
137
cell line
26
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
931
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
737
hg19
177
GRCh38
BIOSAMPLE
TYPE
931 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
binding sites
variant allelic effects
histone modifications
differential activity
eQTL
caQTL
primary cell
hepatocyte
1
13
2
7
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 87 more…
tissue
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
1
11
pigmented layer of retina
20
upper lobe of left lung
7
3
1
3
1
1
+ See 19 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
8
1
8
1
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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